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---
license: apache-2.0
tags:
- LucaOne
- Biological Foundation Model
- Unified Nucleic Acid and Protein Language Model
- Biology
- AI4Science
- AI4Biology
- Bio
language:
- en
---
# LucaOne-Gene(only for nucleinic acid)
LucaOne-Gene - The LUCA Gene language model.
## Installation
You can install the package from source using pip:
```bash
pip install tokenizers==0.19.1
pip install transformers==4.41.2
pip install lucagplm
```
## Usage
```python
from lucagplm import LucaGPLMModel, LucaGPLMTokenizer
# Load model
model = LucaGPLMModel.from_pretrained("LucaGroup/LucaOne-default-step36M")
tokenizer = LucaGPLMTokenizer.from_pretrained("LucaGroup/LucaOne-default-step36M")
# Example usage(Only for DNA or RNA, both seq_type="gene")
seq = "ATCG"
# seq_type="gene", which includes DNA or RNA(Nucleotide Sequences)
inputs = tokenizer(seq, seq_type="gene",return_tensors="pt")
outputs = model(**inputs)
print(outputs.last_hidden_state.shape)
```
## Github
For long sequence embedding, please refer to the git repository:
https://github.com/LucaOne/LucaOne |