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Initial commit for densenet-TTE model
Browse files- .gitattributes +1 -0
- README.md +19 -0
- config.json +6 -0
- densenet_tte.pth +3 -0
.gitattributes
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*.pth filter=lfs diff=lfs merge=lfs -text
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README.md
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# DenseNet Checkpoint
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This is a PyTorch Lightning `.ckpt` checkpoint for a DenseNet model trained on chest CT images with TTE objective.
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## Usage
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A quickstart script is below.
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```python
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import torch
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from src.networks import DenseNet121
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model = DenseNet121(spatial_dims=3, in_channels=1, out_channels=2).to(device)
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state_dict = torch.load(
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loadmodel_path, map_location=f"cuda:{torch.cuda.current_device()}"
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)
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model.load_state_dict(state_dict)
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```
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For detailed instructions please follow the [README in Github repo](https://github.com/som-shahlab/tte-pretraining/tree/main?tab=readme-ov-file#evaluation).
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config.json
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{
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"model_type": "model_3d",
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"model_name": "densenet",
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"pretrain_type": "time-to-event",
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"num_class": 8192
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}
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densenet_tte.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:fb162ead8b701e570c2cb38d34de851fce12eb02a2cafbd58fbe10e77a6bca1b
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size 45680671
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