Spaces:
Sleeping
Sleeping
alexandergagliano
commited on
Commit
·
7627e0b
1
Parent(s):
a55c4c3
Replace README with HF Space configuration
Browse files- README.md +36 -67
- README_HF.md +0 -50
README.md
CHANGED
|
@@ -1,81 +1,50 @@
|
|
| 1 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 2 |
|
| 3 |
-
|
| 4 |
-
<img src="https://github.com/evan-reynolds/re-laiss/blob/main/static/reLAISS_logo.png" style="width: 50%;" alt="reLAISS Logo">
|
| 5 |
-
</p>
|
| 6 |
|
| 7 |
-
|
| 8 |
-
<em>A flexible library for similarity searches of supernovae and their host galaxies.</em>
|
| 9 |
-
</p>
|
| 10 |
|
| 11 |
-
|
| 12 |
|
| 13 |
-
|
|
|
|
|
|
|
|
|
|
| 14 |
|
| 15 |
-
|
| 16 |
|
| 17 |
-
|
| 18 |
-
|
| 19 |
-
|
| 20 |
-
|
| 21 |
-
|
|
|
|
|
|
|
|
|
|
| 22 |
|
| 23 |
-
|
| 24 |
-
client.load_reference(
|
| 25 |
-
path_to_sfd_folder='./sfddata-master', # Directory for SFD dust maps
|
| 26 |
-
weight_lc=3, # Upweight lightcurve features for neighbor search
|
| 27 |
-
)
|
| 28 |
|
| 29 |
-
|
| 30 |
-
|
| 31 |
-
|
| 32 |
-
n=5, # number of neighbors to retrieve
|
| 33 |
-
plot=True, # plot and save figures
|
| 34 |
-
save_figures=True,
|
| 35 |
-
path_to_figure_directory='./figures'
|
| 36 |
-
)
|
| 37 |
-
|
| 38 |
-
# print closest neighbors and their distances
|
| 39 |
-
print(neigh[["iau_name", "dist"]])
|
| 40 |
-
```
|
| 41 |
|
| 42 |
-
|
| 43 |
|
| 44 |
-
If you use reLAISS
|
| 45 |
|
| 46 |
```
|
| 47 |
-
|
| 48 |
-
doi = {10.3847/2515-5172/adef56},
|
| 49 |
-
url = {https://dx.doi.org/10.3847/2515-5172/adef56},
|
| 50 |
-
year = {2025},
|
| 51 |
-
month = {jul},
|
| 52 |
-
publisher = {The American Astronomical Society},
|
| 53 |
-
volume = {9},
|
| 54 |
-
number = {7},
|
| 55 |
-
pages = {189},
|
| 56 |
-
author = {Reynolds, E. and Gagliano, A. and Villar, V. A.},
|
| 57 |
-
title = {reLAISS: A Python Package for Flexible Similarity Searches of Supernovae and Their Host Galaxies},
|
| 58 |
-
journal = {Research Notes of the AAS},
|
| 59 |
-
}
|
| 60 |
-
|
| 61 |
-
|
| 62 |
-
@ARTICLE{2024ApJ...974..172A,
|
| 63 |
-
author = {{Aleo}, P.~D. and {Engel}, A.~W. and {Narayan}, G. and {Angus}, C.~R. and {Malanchev}, K. and {Auchettl}, K. and {Baldassare}, V.~F. and {Berres}, A. and {de Boer}, T.~J.~L. and {Boyd}, B.~M. and {Chambers}, K.~C. and {Davis}, K.~W. and {Esquivel}, N. and {Farias}, D. and {Foley}, R.~J. and {Gagliano}, A. and {Gall}, C. and {Gao}, H. and {Gomez}, S. and {Grayling}, M. and {Jones}, D.~O. and {Lin}, C. -C. and {Magnier}, E.~A. and {Mandel}, K.~S. and {Matheson}, T. and {Raimundo}, S.~I. and {Shah}, V.~G. and {Soraisam}, M.~D. and {de Soto}, K.~M. and {Vicencio}, S. and {Villar}, V.~A. and {Wainscoat}, R.~J.},
|
| 64 |
-
title = "{Anomaly Detection and Approximate Similarity Searches of Transients in Real-time Data Streams}",
|
| 65 |
-
journal = {\apj},
|
| 66 |
-
keywords = {Supernovae, Transient detection, Astronomical methods, Time domain astronomy, Time series analysis, Astrostatistics techniques, Classification, Light curves, Random Forests, 1668, 1957, 1043, 2109, 1916, 1886, 1907, 918, 1935, Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Instrumentation and Methods for Astrophysics},
|
| 67 |
-
year = 2024,
|
| 68 |
-
month = oct,
|
| 69 |
-
volume = {974},
|
| 70 |
-
number = {2},
|
| 71 |
-
eid = {172},
|
| 72 |
-
pages = {172},
|
| 73 |
-
doi = {10.3847/1538-4357/ad6869},
|
| 74 |
-
archivePrefix = {arXiv},
|
| 75 |
-
eprint = {2404.01235},
|
| 76 |
-
primaryClass = {astro-ph.HE},
|
| 77 |
-
adsurl = {https://ui.adsabs.harvard.edu/abs/2024ApJ...974..172A},
|
| 78 |
-
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
|
| 79 |
-
}
|
| 80 |
```
|
| 81 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
title: reLAISS - Supernova Similarity Search
|
| 3 |
+
emoji: 🌟
|
| 4 |
+
colorFrom: blue
|
| 5 |
+
colorTo: purple
|
| 6 |
+
sdk: docker
|
| 7 |
+
pinned: false
|
| 8 |
+
license: mit
|
| 9 |
+
---
|
| 10 |
|
| 11 |
+
# reLAISS: Supernova Similarity Search
|
|
|
|
|
|
|
| 12 |
|
| 13 |
+
Find similar supernovae using light curve and host galaxy features! This interactive tool uses the reLAISS (re-implementation of LAISS) algorithm to search through 25,000+ ZTF transients.
|
|
|
|
|
|
|
| 14 |
|
| 15 |
+
## Features
|
| 16 |
|
| 17 |
+
- **Fast similarity search** using approximate nearest neighbors (NGT)
|
| 18 |
+
- **Flexible feature selection** - Choose from 25 light curve features and 18 host galaxy properties
|
| 19 |
+
- **Interactive visualizations** - Compare light curves and analyze features
|
| 20 |
+
- **Real-time data** - Fetches metadata from ANTARES and TNS APIs
|
| 21 |
|
| 22 |
+
## Usage
|
| 23 |
|
| 24 |
+
1. **Enter a ZTF Object ID** (e.g., `ZTF21abbzjeq`)
|
| 25 |
+
2. **Select features** using the Quick Presets or customize your selection
|
| 26 |
+
3. **Click Search** to find similar transients
|
| 27 |
+
4. **Explore results** across multiple tabs:
|
| 28 |
+
- Summary: Overview cards for each match
|
| 29 |
+
- Light Curves: Visual comparison of photometry
|
| 30 |
+
- Feature Analysis: Detailed feature breakdown
|
| 31 |
+
- Host Galaxies: Host galaxy images and properties
|
| 32 |
|
| 33 |
+
## Performance
|
|
|
|
|
|
|
|
|
|
|
|
|
| 34 |
|
| 35 |
+
- **First search**: ~90 seconds (one-time preprocessing + caching)
|
| 36 |
+
- **Subsequent searches**: ~3-5 seconds
|
| 37 |
+
- **Index rebuilds** (when changing features): ~10-15 seconds
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 38 |
|
| 39 |
+
## Citation
|
| 40 |
|
| 41 |
+
If you use reLAISS in your research, please cite:
|
| 42 |
|
| 43 |
```
|
| 44 |
+
Reynolds et al. (2024) - reLAISS: A re-implementation of LAISS for transient similarity search
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 45 |
```
|
| 46 |
|
| 47 |
+
## Links
|
| 48 |
+
|
| 49 |
+
- [GitHub Repository](https://github.com/evan-reynolds/re-laiss/)
|
| 50 |
+
- [Original LAISS Paper](https://arxiv.org/abs/2109.01665)
|
README_HF.md
DELETED
|
@@ -1,50 +0,0 @@
|
|
| 1 |
-
---
|
| 2 |
-
title: reLAISS - Supernova Similarity Search
|
| 3 |
-
emoji: 🌟
|
| 4 |
-
colorFrom: blue
|
| 5 |
-
colorTo: purple
|
| 6 |
-
sdk: docker
|
| 7 |
-
pinned: false
|
| 8 |
-
license: mit
|
| 9 |
-
---
|
| 10 |
-
|
| 11 |
-
# reLAISS: Supernova Similarity Search
|
| 12 |
-
|
| 13 |
-
Find similar supernovae using light curve and host galaxy features! This interactive tool uses the reLAISS (re-implementation of LAISS) algorithm to search through 25,000+ ZTF transients.
|
| 14 |
-
|
| 15 |
-
## Features
|
| 16 |
-
|
| 17 |
-
- **Fast similarity search** using approximate nearest neighbors (NGT)
|
| 18 |
-
- **Flexible feature selection** - Choose from 25 light curve features and 18 host galaxy properties
|
| 19 |
-
- **Interactive visualizations** - Compare light curves and analyze features
|
| 20 |
-
- **Real-time data** - Fetches metadata from ANTARES and TNS APIs
|
| 21 |
-
|
| 22 |
-
## Usage
|
| 23 |
-
|
| 24 |
-
1. **Enter a ZTF Object ID** (e.g., `ZTF21abbzjeq`)
|
| 25 |
-
2. **Select features** using the Quick Presets or customize your selection
|
| 26 |
-
3. **Click Search** to find similar transients
|
| 27 |
-
4. **Explore results** across multiple tabs:
|
| 28 |
-
- Summary: Overview cards for each match
|
| 29 |
-
- Light Curves: Visual comparison of photometry
|
| 30 |
-
- Feature Analysis: Detailed feature breakdown
|
| 31 |
-
- Host Galaxies: Host galaxy images and properties
|
| 32 |
-
|
| 33 |
-
## Performance
|
| 34 |
-
|
| 35 |
-
- **First search**: ~90 seconds (one-time preprocessing + caching)
|
| 36 |
-
- **Subsequent searches**: ~3-5 seconds
|
| 37 |
-
- **Index rebuilds** (when changing features): ~10-15 seconds
|
| 38 |
-
|
| 39 |
-
## Citation
|
| 40 |
-
|
| 41 |
-
If you use reLAISS in your research, please cite:
|
| 42 |
-
|
| 43 |
-
```
|
| 44 |
-
Reynolds et al. (2024) - reLAISS: A re-implementation of LAISS for transient similarity search
|
| 45 |
-
```
|
| 46 |
-
|
| 47 |
-
## Links
|
| 48 |
-
|
| 49 |
-
- [GitHub Repository](https://github.com/evan-reynolds/re-laiss/)
|
| 50 |
-
- [Original LAISS Paper](https://arxiv.org/abs/2109.01665)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|