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Browse files- .gitattributes +12 -0
- BioNER-Q2_K.gguf +3 -0
- BioNER-Q3_K_L.gguf +3 -0
- BioNER-Q3_K_M.gguf +3 -0
- BioNER-Q3_K_S.gguf +3 -0
- BioNER-Q4_0.gguf +3 -0
- BioNER-Q4_K_M.gguf +3 -0
- BioNER-Q4_K_S.gguf +3 -0
- BioNER-Q5_0.gguf +3 -0
- BioNER-Q5_K_M.gguf +3 -0
- BioNER-Q5_K_S.gguf +3 -0
- BioNER-Q6_K.gguf +3 -0
- BioNER-Q8_0.gguf +3 -0
- README.md +92 -0
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README.md
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---
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library_name: transformers
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tags:
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- TensorBlock
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- GGUF
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base_model: haydn-jones/BioNER
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---
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<div style="width: auto; margin-left: auto; margin-right: auto">
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<img src="https://i.imgur.com/jC7kdl8.jpeg" alt="TensorBlock" style="width: 100%; min-width: 400px; display: block; margin: auto;">
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</div>
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<div style="display: flex; justify-content: space-between; width: 100%;">
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<div style="display: flex; flex-direction: column; align-items: flex-start;">
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<p style="margin-top: 0.5em; margin-bottom: 0em;">
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Feedback and support: TensorBlock's <a href="https://x.com/tensorblock_aoi">Twitter/X</a>, <a href="https://t.me/TensorBlock">Telegram Group</a> and <a href="https://x.com/tensorblock_aoi">Discord server</a>
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</p>
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</div>
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</div>
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## haydn-jones/BioNER - GGUF
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This repo contains GGUF format model files for [haydn-jones/BioNER](https://huggingface.co/haydn-jones/BioNER).
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The files were quantized using machines provided by [TensorBlock](https://tensorblock.co/), and they are compatible with llama.cpp as of [commit b4242](https://github.com/ggerganov/llama.cpp/commit/a6744e43e80f4be6398fc7733a01642c846dce1d).
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<div style="text-align: left; margin: 20px 0;">
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<a href="https://tensorblock.co/waitlist/client" style="display: inline-block; padding: 10px 20px; background-color: #007bff; color: white; text-decoration: none; border-radius: 5px; font-weight: bold;">
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Run them on the TensorBlock client using your local machine ↗
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</a>
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</div>
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## Prompt template
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```
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<|begin_of_text|><|start_header_id|>system<|end_header_id|>
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Cutting Knowledge Date: December 2023
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Today Date: 26 Jul 2024
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{system_prompt}
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Analyze the given paragraph to identify and categorize small molecules and macromolecules/biologics (or classes thereof), including their synonyms.
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Output format:
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{"categories":["cat1"],"molecules":[{"name":"name","alternatives":["alt1","alt2"],"is_class":false}],"biologics":[{"name":"name","alternatives":[],"is_class":true}]}
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Instructions:
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1. Identify all small molecules and biologics in the paragraph
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2. Tag each entity, including all synonyms
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3. Assign one or more of the following category tags to the paragraph if relevant information is present
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- Structure/Properties, Chemistry, Pharmacology, Synthesis/Formulation, Safety/Regulation, None<|eot_id|><|start_header_id|>user<|end_header_id|>
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{prompt}<|eot_id|><|start_header_id|>assistant<|end_header_id|>
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```
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## Model file specification
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| Filename | Quant type | File Size | Description |
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| -------- | ---------- | --------- | ----------- |
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| [BioNER-Q2_K.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q2_K.gguf) | Q2_K | 3.179 GB | smallest, significant quality loss - not recommended for most purposes |
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| [BioNER-Q3_K_S.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q3_K_S.gguf) | Q3_K_S | 3.665 GB | very small, high quality loss |
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| [BioNER-Q3_K_M.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q3_K_M.gguf) | Q3_K_M | 4.019 GB | very small, high quality loss |
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| [BioNER-Q3_K_L.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q3_K_L.gguf) | Q3_K_L | 4.322 GB | small, substantial quality loss |
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| [BioNER-Q4_0.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q4_0.gguf) | Q4_0 | 4.661 GB | legacy; small, very high quality loss - prefer using Q3_K_M |
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| [BioNER-Q4_K_S.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q4_K_S.gguf) | Q4_K_S | 4.693 GB | small, greater quality loss |
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| [BioNER-Q4_K_M.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q4_K_M.gguf) | Q4_K_M | 4.921 GB | medium, balanced quality - recommended |
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| [BioNER-Q5_0.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q5_0.gguf) | Q5_0 | 5.599 GB | legacy; medium, balanced quality - prefer using Q4_K_M |
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| [BioNER-Q5_K_S.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q5_K_S.gguf) | Q5_K_S | 5.599 GB | large, low quality loss - recommended |
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| [BioNER-Q5_K_M.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q5_K_M.gguf) | Q5_K_M | 5.733 GB | large, very low quality loss - recommended |
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| [BioNER-Q6_K.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q6_K.gguf) | Q6_K | 6.596 GB | very large, extremely low quality loss |
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| [BioNER-Q8_0.gguf](https://huggingface.co/tensorblock/BioNER-GGUF/blob/main/BioNER-Q8_0.gguf) | Q8_0 | 8.541 GB | very large, extremely low quality loss - not recommended |
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## Downloading instruction
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### Command line
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Firstly, install Huggingface Client
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```shell
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pip install -U "huggingface_hub[cli]"
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```
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Then, downoad the individual model file the a local directory
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```shell
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huggingface-cli download tensorblock/BioNER-GGUF --include "BioNER-Q2_K.gguf" --local-dir MY_LOCAL_DIR
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```
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If you wanna download multiple model files with a pattern (e.g., `*Q4_K*gguf`), you can try:
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```shell
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huggingface-cli download tensorblock/BioNER-GGUF --local-dir MY_LOCAL_DIR --local-dir-use-symlinks False --include='*Q4_K*gguf'
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```
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