Training procedure

Train Metrics:

'eval_loss': 0.5060210824012756,
'eval_accuracy': 0.9445510110929896,
'eval_precision': 0.2343126275786286,
'eval_recall': 0.7358567800530282,
'eval_f1': 0.3554441818087852,
'eval_auc': 0.8424179078508613,
'eval_mcc': 0.39553114656159183

Framework versions

PEFT 0.5.0

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Collection including AmelieSchreiber/esm2_t12_35M_lora_binding_sites_1111K_cp3

ESMBind (ESMB) for Protein Binding Sites

Collection

ESMBind (or ESMB) are LoRA finetuned ESM-2 models for predicting general binding sites and active sites of proteins based on sequence alone. • 14 items • Updated Oct 8, 2023 • 4