OTAR3088/celltissue_train_test

CellTissue Data train/test

*** Data curation still in progress ***

Papers manually annotated and reviewed, for the following entity types, where applicable:

  - Cell type
  - Cell line
  - Tissue
  - Cell context
  - Cell component

Dataset Sources [optional]

The following papers were annotated for use as training / testing text data:

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PMCID | Journal | Year

PMC12115102 | Plants | 2025

PMC12101583 | Cancer Biology & Therapy | 2025

PMC12081701 | Nature Communications | 2025

PMC11075828 | PLoS Pathogens | 2024

PMC10442740 | Biomedical Reports | 2023

PMC12141184 | Saudi Pharmaceutical Journal | 2025

PMC12118871 | PLoS One | 2025

PMC12105127 | BMC Complementary Medicine and Therapies | 2025

PMC12072392 | International Journal of Molecular Sciences | 2025

PMC11699618 | Iscience | 2024

PMC11641291 | International Journal of Molecular Sciences | 2024

PMC11419360 | PLoS Pathogens | 2024

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Uses

The aim for this data is for it to be used for the testing and correction of NER models generated in the OTAR3088 project.

Dataset Structure

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Curation Rationale

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Source Data

Data Collection and Processing

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Who are the source data producers?

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Annotations [optional]

Annotation process

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Who are the annotators?

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Personal and Sensitive Information

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Bias, Risks, and Limitations

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Recommendations

Users should be made aware of the risks, biases and limitations of the dataset. More information needed for further recommendations.

Citation [optional]

BibTeX:

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APA:

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Glossary [optional]

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Dataset Card Authors [optional]

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Dataset Card Contact

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