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in Data Studio
Random & Cluster simulation
Random & Cluster simulation includes DDI data for running benchmarking evaluation in DDI-Ben, where random refers random split of drugs and cluster refers using cluster-based strategy to conduct distribution change simulation.
Real Scene
Real_scene_drugbank includes DDI data from DrugBank, where drugs are divided into three sequential training-validation-test sets based on their market approval timeline.
Citation
If you find the data useful, please cite:
@article{shen2025benchmarking,
title={Benchmarking drug-drug interaction prediction methods: a perspective of distribution changes},
author={Shen, Zhenqian and Zhou, Mingyang and Zhang, Yongqi and Yao, Quanming},
journal={Bioinformatics},
year={2025},
publisher={Oxford University Press},
url={https://arxiv.org/abs/2410.18583},
}
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