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Datasets:
morrislab
/
rna-loc-fazal

Modalities:
Text
Formats:
parquet
Size:
1K - 10K
Tags:
biology
rna
genomics
Libraries:
Datasets
pandas
License:
Dataset card Data Studio Files Community
1
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Auto-converted to Parquet
transcript_id
stringlengths
17
23
gene
stringlengths
2
12
chromosome
stringclasses
24 values
sequence
stringlengths
348
24.3k
cds
sequencelengths
348
24.3k
splice
sequencelengths
348
24.3k
target
sequencelengths
8
8
ENST00000229416.10
GCLC
6
ATAAAACCTGGAGCGCAGGATCGCGCCCAGGAGCGGCGAGCTAGCGGACGCAAAGACTGGGCATGCTCCGCGGCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCGTGGGGTCCGCCGCCGCCGCATCGGAGCGGGAGGAGGAGCAGCGGGGAGGGCGAGGCCGCCGGGCCGAGAGCCGTCCCGCCTGCTCTCGGTCTTCTGCCTTCGCCTCCGCGCGGTGCGTCGGACCCAGGGTCTGTCACCTGGGCGCCAGGGGCCGCCGCCGGGGAGCCGGAGCGGGCAGGACCCTCCCTCCGCCGACTGCGGCCCGAGAGCGCCCCCGCGGGGTGGAGCGGCAGCCGCCTTCTGCGGGCGGCTGAGTGTCCGTCTCGCGCCCGGAGCGGGCGACCGCCGTCAGCCCGGAGGAGGAGGAGGAGGAGGAGGGGGCGGCCATGGGGCTGCTGTCCCAGGGCTCGCCGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTTCCTGCACATCTACCACGCCGTCAAGGACCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGGTGGAATACATGTTGGTATCTTTTGATCATGAAAATAAAAAAGTCCGGTTGGTCCTGTCTGGGGAGAAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGGACAAACCCAAACCATCCTACCCTTTGGAGACCAGAGTATGGGAGTTACATGATTGAAGGGACACCAGGACAGCCCTACGGAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAACATGCGAAAACGCCGGAAGGAGGCTACTTCTATATTAGAAGAAAATCAGGCTCTTTGCACAATAACTTCATTTCCCAGATTAGGCTGTCCTGGGTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTCCAGATGAAGCAATAAACAAGCACCCTCGCTTCAGTACCTTAACAAGAAATATCCGACATAGGAGAGGAGAAAAGGTTGTCATCAATGTACCAATATTTAAGGACAAGAATACACCATCTCCATTTATAGAAACATTTACTGAGGATGATGAAGCTTCAAGGGCTTCTAAGCCGGATCATATTTACATGGATGCCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTGAGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAGATGATAGAACTCGGGAGGAGCGAGGACTGGAGCCATTGAAGAACAATAACTATAGGATCAGTAAATCCCGATATGACTCAATAGACAGCTATTTATCTAAGTGTGGTGAGAAATATAATGACATCGACTTGACGATAGATAAAGAGATCTACGAACAGCTGTTGCAGGAAGGCATTGATCATCTCCTGGCCCAGCATGTTGCTCATCTCTTTATTAGAGACCCACTGACACTGTTTGAAGAGAAAATACACCTGGATGATGCTAATGAGTCTGACCATTTTGAGAATATTCAGTCCACAAATTGGCAGACAATGAGATTTAAGCCCCCTCCTCCAAACTCAGACATTGGATGGAGAGTAGAATTTCGACCCATGGAGGTGCAATTAACAGACTTTGAGAACTCTGCCTATGTGGTGTTTGTGGTACTGCTCACCAGAGTGATCCTTTCCTACAAATTGGATTTTCTCATTCCACTGTCAAAGGTTGATGAGAACATGAAGGTAGCACAGAAAAGAGATGCTGTCTTGCAGGGAATGTTTTATTTCAGGAAAGATATTTGCAAAGGTGGCAATGCAGTGGTGGATGGTTGTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTCATGAGCATAGACACCATCATCAATGGGAAGGAAGGTGTGTTTCCTGGACTGATCCCAATTCTGAACTCTTACCTTGAAAACATGGAAGTGGATGTGGACACCAGATGTAGTATTCTGAACTACCTAAAGCTAATTAAGAAGAGAGCATCTGGAGAACTAATGACAGTTGCCAGATGGATGAGGGAGTTTATCGCAAACCATCCTGACTACAAGCAAGACAGTGTCATAACTGATGAAATGAATTATAGCCTTATTTTGAAGTGTAACCAAATTGCAAATGAATTATGTGAATGCCCAGAGTTACTTGGATCAGCATTTAGGAAAGTAAAATATAGTGGAAGTAAAACTGACTCATCCAACTAGACATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATCTAGAGTTTATACAGTGTACATGTACATAGTAAAGTATTTTTGATTAACAATGTATTTTAATAACATATCTAAAGTCATCATGAACTGGCTTGTACATTTTTAAATTCTTACTCTGGAGCAACCTACTGTCTAAGCAGTTTTGTAAATGTACTGGTAATTGTACAATACTTGCATTCCAGAGTTAAAATGTTTACTGTAAATTTTTGTTCTTTTAAAGACTACCTGGGACCTGATTTATTGAAATTTTTCTCTTTAAAAACATTTTCTCTCGTTAATTTTCCTTTGTCATTTCCTTTGTTGTCTACATTAAATCACTTGAATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGTTTCTAGCACCTTATCTATGATGTTTCTTTTGCAATTGGAATAATCACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCTGTTATCAAAGGAACTTTTCTTTGTTTAAATTTGCTGATGCAGGAATTAAGTTTAAACACAACTCTATAGAAAGAAAGGAGATTATTACCCAGAATTCACATGTAGTGATTATTAAGGACAATTTTTTTTTTTAACTAAAAAAGTTGGCGGCAGGGGTGGGGGGTGGCAATCATTTTTCTTCCTATACATACAAAGGATATTGTCAAAAATGGCGTTCTTCTCTTGTGGCCTGTTATTCTGATTGCTGCTGTATACAGTTTTGTCACTCTTTAGTTTTTAGTTAAGCATACTGATAGACTTTCCTCTAAAAGCCATTCACTCCAGATTTTACCTGGGGAATATTCTACATACTGCTTACTTTCTCTATAAAACTCATCAATAAATCATGAAAGGCACTGAGTTTTGTAAATCAGGACCCTAAATGTTTAATTGTAAATAAGTTTCAGATAATTATTATAGCTTTGCGTTGAAGTTTGTTGTTTTTTTTCTCAACTAGTTAAGTCAACTGCTTCTGAAATAACTCTGTATTGTAGATTATGCAGATCTTTACAGGCATAAATATTTAAACTGTAATATGCTAACTTGAAGAGATTGCAATAAAGCTGCTTCAGCTAACCCTGTTTATGTTTAAATACTAGGGTTTGTTCTATATTTTATACATGCATTTTGGATGATTAAAGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGGCAGATAAATTGAAATGTTTGTGGTATGAGGAAATAAAAGAATGGAATTAGCTTTCATTCAGAAA
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ENST00000341376.10
NFYA
6
GATTCCCCTTTGTTCGGGTTCGCCATTTTGCTAGGCAGCGGCAGTGGCGGCGGCAGCGGCGGCTGGAGCCTCTGATTGGGTTTCGGAGTCCGGTACTGGAGCCAATCAGCGCGGGCAGCGAACCGGGGGAGCGAGGCACGGAGTGTACCTCACAGCCTTCTAGGATCTCCAGAGTGGACAGGAATCTCACTTGGAGGGACCATGGAGCAGTATACAGCAAACAGCAATAGTTCGACAGAGCAGATTGTTGTCCAGGCAGGACAGATTCAGCAGCAGCAGCAGGGTGGTGTCACTGCTGTGCAGTTGCAGACTGAGGCCCAGGTGGCATCCGCCTCAGGCCAGCAAGTCCAGACCCTCCAGGTAGTCCAAGGGCAGCCATTAATGGTGCAGGTCAGTGGAGGCCAGCTAATCACATCAACTGGCCAACCCATCATGGTCCAGGCTGTCCCTGGTGGACAAGGTCAAACCATCATGCAAGTACCTGTTTCTGGAACACAGGGTTTGCAGCAAATACAGTTGGTCCCACCTGGACAGATCCAGATCCAGGGTGGACAGGCTGTGCAGGTGCAGGGCCAGCAGGGCCAGACCCAGCAGATCATCATCCAGCAGCCCCAGACGGCTGTCACTGCTGGCCAGACTCAGACACAGCAGCAGATTGCTGTCCAGGGACAGCAAGTGGCACAGACTGCTGAAGGGCAGACCATCGTCTATCAACCAGTTAATGCAGATGGCACCATTCTCCAGCAAGTTACAGTCCCTGTTTCAGGCATGATCACTATCCCAGCAGCCAGTTTGGCAGGAGCACAGATTGTTCAAACAGGAGCCAATACCAACACAACCAGCAGTGGGCAAGGGACTGTCACTGTGACACTACCAGTGGCAGGCAATGTGGTCAATTCAGGAGGGATGGTCATGATGGTTCCTGGGGCTGGCTCTGTGCCTGCTATCCAAAGAATCCCTCTACCTGGAGCAGAGATGCTTGAAGAAGAGCCTCTCTACGTGAATGCCAAACAATACCACCGTATTCTTAAGAGGAGGCAAGCCCGAGCTAAACTAGAGGCAGAAGGGAAAATTCCAAAGGAGAGAAGGAAATACCTGCATGAGTCTCGGCACCGTCATGCCATGGCACGGAAGCGTGGTGAAGGTGGACGATTTTTCTCTCCAAAGGAAAAGGATAGTCCCCATATGCAGGATCCAAACCAAGCCGATGAAGAAGCAATGACACAGATCATCCGAGTGTCCTAACCCCACGCCATGTGATGGAGCTGATCAAGGTCATGTTTCTCACTGTTCCAGGAAATTGATCAACTCTTCCAATGGGACATTGATGATCACATTCTGCCCTTTACTACAGGACAGAAACCACTTAGTTTTTAATAAGTGGCTCAGTATTACAATTGCAGCGATGCCTGGCAAATTGAAGTTGCAAGCCTTTGTCTTACTCTTTCAGTCAGGACCTATTTCAGACTGTTGATGACATTGACATTTCATGGATTCGGATGATGCAAGGAGACACATGCCACCCCAGCAGTACACAAAGCACTTACCTTGACTGGTGAAGTCAGCCAGCCATCTCAGCAGGGAAGAACAACCTTCTCAACCAAAACTGCAATCAGGAAAGCAGCAGCCCACTCCTTCCCATGGAATCTAGACAGCATTTATCCCTCTGGTGGGGGAATCTCACACTGACTAACTGAATGGACGCTTTGTATTCAGAGATGGCTTCCAGGCAAGGAAGTTCTATCTTGTGATACGGAAACAATAAATTCCTGAGATACATTCTTCCAATCTGTGGTAATAATAAGAATTCCTCTCTGCCCAGATGGTAGGTTGATATTTCTGGACTCTAGCCAAGAAAAAGCTAATTCTGGGGATAGAATGATAAAAGACTCAAGCACTAAAAATATACATTGCCGAATCTCTTTTTCTAGCTTTGAAAAGTTGTGGCCTGCTTGTCCCTCTGTTGACTGGTCATCTGGACCATCGTACTTGCTGTGGCTACTTCTAAGACAATGTAGAGGGTTATTAAACCTTGAAACTGCCTTTCCTAAGTAGAGAACAAGACTATTCAACAACTTCTTTGCTGAAGCACTGAGGAGATTTGTAATACTCCTAAAGGAAGGGCCAAACTAGAGATTTTCAATCATAGACTTTGTGACAGCATTTGGGGAACTAAAAGATTCATGTGTTTCAGCCTAGTGGGAGAGAGTGGGGGAGAGGAAGAGAGAGAGAGAGCATGTATACCCGTATGTTATCATAGAGCACGATTCTCCAGTGGATGGATACCTGGAATGGATCATTAAGATGAAGAGAGTAATTCACATTTACTCTAGAACCTTTAACAAGCACTGAAAGGAAGAAGCCTGAGATTTGATCCTTGACAATTTCTGGAAAGCACTGGTCAGTCACACTGTCCTGGACAGAGTCCAAGTTACCCACTAAAGCTTGAGGTGGATGTTGGCTTCACTCCTGCAGCACAATGCTGGCCCTAGAAAGCGAGCATTTTCATTCTTCCCATGGCAGCTGATTCTTTGGTGCCAGTTTTCATGTTTTCTCCATAGGCCTTGTGCAGAAAGGTTTTCTCATTGCATCCATACTGTGAGAATAAACTGCAGACTGAAAGAAACATGCCTGCAGGGTCAGGAACTGGGCCACTGTTCCCAGAACGGGTTGTGCCTCAGAAATCTATTTCTCTTTTAGATGTTGAACCCTGAGAGAACTAAGATGATATTTCAGAAGAGTTGGCTGCCTTCTCTGGAAACAAGGAAAACCCAATAATTCCGAGGAACATTGGGGGTTAAATACCAAGAATAAAAATTGGTTCTTCTTTGACTTCAGCTTAACTGTATTAAGACAGAAATTAAGCCCTCTAAAAACACCACAAAGAGAGATGATTGTAATGATAGAAATAGAGGTACAGAGCTATGCAAAGGAAACAGGAAGTGAAATATTCCTAGTCCCAGGGATCTGGTAATCGCTCCTGGCTTCCAGATGTCAAAGGACTGATCCTTTGGTAAGCTCACTAGAAACTTCTAGCTCTACAAGAGTTTGGGATATTAATGTTATTCAGTAAGTCCCAAGTTTTTCAGAGAATAGATTACTAACAATGAGGAATTTATATTCCTTGGTTAATTTAGGAGTCTAAGATGCAGAGTTCAGAAAGAAATTACTCAGACCTAACTTTGAGTGCTTAAGCTGCCAACAGTTAGAAGATGCTATTTATTTGTGTCTGTAAGTTTGTACATAGTAATGCCAGCCTTGTTGCTGAATTTTTTATTTGGGGGGAGATGACTTTGAATTTTGTTTGAAATGCTTCAGTTGTCATTTTGTCATTGCATTTCAAATAGCTCATGACCCTTTTCTTGTGGTCACTTTGGCACACCATAGTAGCCCACAAAGTGGGGGCAGGGTATTGACATTTGGATTTTTTCTTTGATACTAGTTCTTTTATTCATTTTTATTTGTGACTGTAGTGATAACTTTACAGATGGAGAAAGAGTGAATGGATGAATGAATAATTGGTTTAATGCCTAGTTATGCAACTTGAGTGCTTTTTTTTTTTTTTGCAGGATAATTTTAAGTGTATATATTTTAACTGCACTGGTACATTGAACATGTCAGTGTCGATGCCACTGGACCAACAGAGCATTTTGTGGCTATAGGGTGCCTGATAATAATGTCTTGATTTTTCTTTGGGATTCAACTATATCGAAGGTTTTTCCCCCAGCAGTATGGGGGCGTACAGGTGATCGATCATTAATGTCATTGCAATTGTTATTTTTTAAAATAAATTTATAAAAATAACCGAAAA
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NIPAL3
1
GCAGCTCTGAATTGGGAAGGGATGAAGGAGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTTTGATAGGTGGGCCTTAGAGGAGACGCCGCCGAGCACCGCAAGAACTGGAAAACACACCCCTCTCTGTCTGCCTGGGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAGCTGAGGAGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGTATTCTTTTGTCATGAGGAAGTGACGGCTGCTGGAGGGAGGTGAACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCCGCCTAGCAGCAGCTCCACCTCCTAGGCCAGGCCCTGTGGGATGCGCCACTAGACCACCATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGGAAAACCTGATTGGCGCCCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCTATTTCAAGACCAAGACATGGTGGCTGGGCCTGTTCCTGATGCTTCTGGGCGAGCTGGGTGTGTTCGCCTCCTACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTCAGCGCAGTTTCTGTGATAGCTAGTGCCATCATAGGAATCATATTCATCAAGGAAAAGTGGAAACCGAAAGACTTTCTGAGGCGCTACGTCTTGTCCTTTGTTGGCTGCGGTTTGGCTGTCGTGGGTACCTACCTGCTGGTGACATTCGCACCCAACAGTCACGAGAAGATGACAGGCGAGAATGTCACCAGGCACCTCGTGAGCTGGCCTTTCCTTTTGTACATGCTGGTGGAGATCATTCTGTTCTGCTTGCTGCTCTACTTCTACAAGGAGAAGAACGCCAACAACATTGTCGTGATTCTTCTCTTGGTGGCGTTACTTGGCTCCATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCGTTTTTGAGTCAAGCCTCACAGATGTACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTCTGTCCACAACCATTGCTATCACAGCAGGTGCAATATTTTACCTGGACTTCATCGGGGAGGACGTGCTGCACATCTGCATGTTTGCACTGGGGTGCCTCATTGCATTCTTGGGCGTCTTCTTAATCACGCGTAACAGGAAGAAGCCCATTCCATTTGAGCCCTATATTTCCATGGATGCCATGCCAGGTATGCAGAACATGCACGATAAAGGGATGACTGTCCAGCCTGAACTTAAAGCTTCTTTTTCCTATGGGGCTCTGGAAAACAATGACAACATTTCTGAGATCTACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGGTCCCCTACCGAGTCCTAGAGCACACCAAGAAGGAATGAGACTCGCCTCCCTCTATTTATAACTGTCCCCTCCAGGCTGACAGTGGTTCAACCCTGAATCCTAAAACTTGCCTTTCAAGTCTCATTTTGTTTCTAACTGAGAACTCTATGGATGATGATCT
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ENST00000321037.4
ENPP4
6
GGAGCGCCCCGAGCGGCGCAGATAGGGACGTTGGGGCTGTGCCCCGCGGCGCGGCGCCTGCCACTGCGCAGGCGCCTCAGGAAGAGCTCGGCATCGCCCCTCTTCCTCCAGGTCCCCCTTCCCCGCAACTTCCCACGAGTGCCAGGTGCCGCGAGCGCCGAGTTCCGCGCATTGGAAAGAAGCGACCGCGGCGGCTGGAACCCTGATTGCTGTCCTTCAACGTGTTCATTATGAAGTTATTAGTAATACTTTTGTTTTCTGGACTTATAACTGGTTTTAGAAGTGACTCTTCCTCTAGTTTGCCACCTAAGTTACTACTAGTATCCTTTGATGGCTTCAGAGCTGATTATCTGAAGAACTATGAATTTCCTCATCTCCAGAATTTTATCAAAGAAGGTGTTTTGGTAGAGCATGTTAAAAATGTTTTTATCACAAAAACATTTCCAAACCACTACAGTATTGTGACAGGCTTGTATGAAGAAAGCCATGGCATTGTGGCTAATTCCATGTATGATGCAGTCACAAAGAAACACTTTTCTGACTCTAATGACAAGGATCCTTTTTGGTGGAATGAGGCAGTACCTATTTGGGTGACCAATCAGCTTCAGGAAAACAGATCAAGTGCTGCTGCTATGTGGCCTGGTACTGATGTACCCATTCACGATACCATCTCTTCCTATTTTATGAATTACAACTCCTCAGTGTCATTTGAGGAAAGACTAAATAATATTACTATGTGGCTAAACAATTCGAACCCACCAGTCACCTTTGCAACACTATATTGGGAAGAACCAGATGCAAGTGGCCACAAATACGGACCTGAAGATAAAGAAAACATGAGCAGAGTGTTGAAAAAAATAGATGATCTTATCGGTGACTTAGTCCAAAGACTCAAGATGTTAGGGCTATGGGAAAATCTTAATGTGATCATTACAAGTGATCATGGGATGACCCAGTGTTCTCAGGACAGACTGATAAACCTGGATTCCTGCATCGATCATTCATACTACACTCTTATAGATTTGAGCCCAGTTGCTGCAATACTTCCCAAAATAAATAGAACAGAGGTTTATAACAAACTGAAAAACTGTAGCCCTCATATGAATGTTTATCTCAAAGAAGACATTCCTAACAGATTTTATTACCAACATAATGATCGAATTCAGCCCATTATTTTGGTTGCCGATGAAGGCTGGACAATTGTGCTAAATGAATCATCACAAAAATTAGGTGACCATGGTTATGATAATTCTTTGCCTAGTATGCATCCATTTCTAGCTGCCCACGGACCTGCATTTCACAAAGGCTACAAGCATAGCACAATTAACATTGTGGATATTTATCCAATGATGTGCCACATCCTGGGATTAAAACCACATCCCAATAATGGGACCTTTGGTCATACTAAGTGCTTGTTAGTTGACCAGTGGTGCATTAATCTCCCAGAAGCCATCGCGATTGTTATCGGTTCACTCTTGGTGTTAACCATGCTAACATGCCTCATAATAATCATGCAGAATAGACTTTCTGTACCTCGTCCATTTTCTCGACTTCAGCTACAAGAAGATGATGATGATCCTTTAATTGGGTGACATGTGCTAGGGCTTATACAAAGTGTCTTTGATTAATCACAAAACTAAGAATACATCCAAAGAATAGTGTTGTAACTATGAAAAAGAATACTTTGAAAGACAAAGAACTTAGACTAAGCATGTTAAAATTATTACTTTGTTTTCCTTGTGTTTTGTTTCGGTGCATTTGCTAATAAGATAACGCTGACCATAGTAAAATTGTTAGTAAATCATTAGGTAACATCTTGTGGTAGGAAATCATTAGGTAACATCAATCCTAACTAGAAATACTAAAAATGGCTTTTGAGAAAAATACTTCCTCTGCTTGTATTTTGCGATGAAGATGTGATACATCTTTAAATGAAAATATACCAAAATTTAGTAGGCATGTTTTTCTAATAAATTTATATATTTGTAAAGAAAACAACAGAAATCTTTATGCAATTTGTGAATTTTGTATATTAGGGAGGAAAAGCTTCCTATATTTTTATATTTACCTTTAATTAGTTTGTATCTCAAGTACCCTCTTGAGGTAGGAAATGCTCTGTGATGGTAAATAAAATTGGAGCAGACAGAAAAGATATAGCAAATGAAGAAATATTTTAAGGAAACCTATTTGAAAAAAAAAGCAAAGACCATTTGATAAAAGCCTGAGTTGTCACCATTATGTCTTAAGCTGTTAGTCTTAAAGATTATTGTTAAAAAATTCAGAAGAAAAGAGAGACAAGTGCTCTTCTCTCTATCTATGCTTAATGCCTTTATGTAAGTTACTTAGTTGTTTGCGTGTGCCTGTGCAAGTGTGTTTGTGTGTGGTTGTGTGGACATTATGTGATTTACTATATAAGGAGGTCAGAGATGGACTGTGGCCAGGCTTCCACATTCCTGAAGCACACAGATCTCAGGAAAGGTTATTTTTGCACTTCATATTTGTTTACTTTCTCCTAACTCACAAGTTAAAATCATAACTTAATTTCATTAACTTTTATCATTTAACTCTCTCATGTTTGTTGTAACCTGAGGTATCCAAATGCTACAGAAAAATTTATGACCCAAATACAAATCTCAATTTGACTGGGACAGAATGAGGAATGGAGATTTTTGTATTTATCTTTGGGACTTTATGCCTTACTTTTTAGGCTATAGAATAGTTAAGAAATTTTAAACAAAATTTAGTATCTTTTGGTCTTTCACACCATTCATATGTTAAGTGGCAGAATAGCCTTAGTGCTACCTCCACTTTTTTCTCCAGTATTTGCATCACAGAAATAATCCCTCTGTTTAACATGTTTGTTCAGAGCCAAGGGTTTATTGTGAAGAACTGTCATCCTGCCTTTGCTAGCTGGTACCTTCTAGTAATCAAAATTAATATGAAGAAACTAGGTTGTGACAGACTAGATTATATTTAGTAGGGGAAAAATTGGGCTCAAGAACCATTCATCAGTACGTGAGACAAGCAGTTAATAGTATGATCTTTAAAGTTTTGACAATATAAAATAAACTTGGTAACTGTTTTACAAATATAAAAGTATAATAAATATGCAGCCCAGTTAAATATTGATTATCTGTGATGGTAAAGAACAACAGTGGTGCCAGTCATCAAACATACAGTGCGTCCTATTGAGTCACTGCTAATTTCTTGAGCCTGGTATTTGCTGCCTATTGTATTTGTGGTTGTTGAGAGGCATTTTCAAACCCTGTATAAATAATCCATGCTGTTGGTCATAAGTTAACTGTATTAAGAACAGTAAAATAAATAAAAACCAATAGTACTAATTTTGCTTTAAAAAAATTTCTAATTTTTTTCACATAAAACAATTATCCTAAAGGTTAATAGTTGATCGAAACAGAATAATAGAAAAATTCTACTTTAATTTCCATTAAAAAGCAAATAGCATTGACACATTTAAAGCTTTTCATTTAAAGTAGTGGATGTTTTTGAAGTATCTAAAATAGTAGCAGAATATTTTATACTTGGTCCTTGCAATGGTGTGAGTTTTAATGATTGCATTATCGTGATTGGTGGTTATGAGTTTCAGAAATCTATACTTGGCATCCAACTCATGAGTGGATTTTATATAGGATGGAACAGGAAGGTATGTCCTGTCAGTATCTTAACCCTTTCAACAAGACATTTACCTATTTGTCTTTCCTTACGTTCTCAAAATATTAACTCGAATTGTAAATTAAGCAAAAATTTAAAAAGTATATGTTGATGGGACAAGAAGAATAGTATTTATTTAATAAAACATATATTATATTGAACTATGTGTTAATTCATTTGTATCTTTTAAAAAATTATCACTGTTAAAGCCATTGACTCCTTTAGTACACTGAGAAAAATCTTATAGTAAAACTAGCCTTTCACATTAAGGTTTTGGTGTGTATTTTGTTAAATAACTAACATGCTGCTCTATTTTCTGGGTGTAGAAAGTATTTGGCTCTAGGAAACATTTACTTGTTTGTGAAAACAATACCCCAAGGTAATAGGAAAAGTTTGAGTTAAGTGTTTTTAATTCAGTCAGTGAATTCAGAATAAGTACATTCATGTATAACATAGGGACAGTTCTGCTGCTGTTATTTATATGCAATTCTTCTGGTAAATAGCAATAGAATAAAACATATTTCAATGTTTGTGTATAGGTTTTATATTATTATTCCACTAGGAATGGCATAAGAATTTATAGATAAATTCTTGTAACATTAAAGGATTAAAATGTTTTTACATTGTTTTTGGGTGTCTCCTTCTTGTGCCCATATCTGATAAGCTTTATGGATTATTGCATTTAATTCCTTTTATTTGGAGGGTTTTACTTCCTTGTTAACATATAAAGTTATAAATGAAGGACAAGGAGGAGATGGAAAATGTGTATTTATTGTTAATTCTTAAAATAGTGTGTAAATAAAATAACATCAGTGTGCTTTAAAGAAATGTGTATGTAGTGCCTTAATTTAAATTAAAATATTTTTGACTGTTACTTGAGTTCAGAATTAATGACTTTGTTCATGATTTTTAAAATGTGTGTGAATAAAATCTACCAAAAAATTCTTACTGTAATTATTAAATATAAAGTTCAGTGTCA
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ENST00000002829.7
SEMA3F
3
AGCGCAGCGCAGGACCTGGGTACGCCGCGAGGAACCGTGCAGCCCAGCGCGGCCGCCCGGCCCGGGTCCAGCAGCCAGGAGAGCGCAGCGCTTCGAAGCCGAGTGCGCGCCACCGCCCGCGCCCCGCGCTGGGGAATGCGCCCTCGGCGCGCCGGCCAGGGGGCGCCCGCAGCCCACCCCAGGGGAGGCGGCCCCGAGCGCCCCTGAGCCTTCCCATGGCCCGGGCTGGGGCCCGGGCCCTCGGCTGCTGACGCGCCCGAAGCCCGCGGAACCGGTTAAGCCGCGGCCGCGGCGCCGATCCCGGCTGAGGCGCAGCGGCGAGAGGTCGCGGGCAGGGCCATGGCCCCGGGGGGCCGCTAGCGCGGACCGGCCCAACGGGAGCCGCTCCGTGCCGCCGCCGCCGCCCGGGCGCCCAGGCCCCGCCGCTGCGGAAGAGGTTTCTAGAGAGTGGAGCCTGCTTCCTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTCTTCTTCTCTGGGCTTCCCTACTGACCGGGGCCTGGCCATCCTTCCCCACCCAGGACCACCTCCCGGCCACGCCCCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCCACAGGCACCGCCCACTTCTTCAACTTCCTGCTCAACACAACCGACTACCGAATCTTGCTCAAGGACGAGGACCACGACCGCATGTACGTGGGCAGCAAGGACTACGTGCTGTCCCTGGACCTGCACGACATCAACCGCGAGCCCCTCATTATACACTGGGCAGCCTCCCCACAGCGCATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAACACACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCAGAGCCACGGATGGTGCCCTCCGCCCGATGCCCACAGCCCCACGCCAGGATTACATCTTCTACCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGGCCCTCATCAATGAGGAGCTCTATGCTGGTGTGTACATCGATTTTATGGGCACTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGTCGTTCATCCATGCTGAGCTCATTCCTGACAGTGCGGAGCGCAATGATGATAAGCTTTACTTCTTCTTCCGTGAGCGGTCGGCAGAGGCGCCGCAGAGCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCCTGAACGATGACGGTGGTCACTGTTGCCTGGTCAACAAGTGGAGCACATTCCTGAAGGCGCGGCTCGTCTGCTCTGTCCCGGGCGAGGATGGCATTGAGACTCACTTTGATGAGCTCCAGGACGTGTTTGTCCAGCAGACCCAGGACGTGAGGAACCCTGTCATTTACGCTGTCTTTACCTCCTCTGGCTCCGTGTTCCGAGGCTCTGCCGTGTGTGTCTACTCCATGGCTGATATTCGCATGGTCTTCAACGGGCCCTTTGCCCACAAAGAGGGGCCCAACTACCAGTGGATGCCCTTCTCAGGGAAGATGCCCTACCCACGGCCGGGCACGTGCCCTGGTGGAACCTTCACGCCATCTATGAAGTCCACCAAGGATTATCCTGATGAGGTGATCAACTTCATGCGCAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTAGTCCGCACAGGTGCTCCCTACCGCCTTACCACTATTGCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTATGAGGTGCTTTTCCTGGGCACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCTGCCCAAGGATGACCAGGAGTTGGAGGAGCTCATGCTGGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCGTCAAGACCATGACCATCTCTTCTAAGAGGCAACAACTCTACGTGGCGTCAGCCGTGGGTGTCACACACCTGAGCCTGCACCGCTGCCAGGCGTATGGGGCTGCCTGTGCTGACTGCTGCCTTGCCCGGGACCCTTACTGTGCCTGGGATGGCCAGGCCTGCTCCCGCTATACAGCATCCTCCAAGAGGCGGAGCCGCCGGCAGGACGTCCGGCACGGAAACCCCATCAGGCAGTGCCGTGGGTTCAACTCCAATGCCAACAAGAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCGCCGAGAGATTCGTGCAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGGCCTCTACTCCTGCACAGCCACTGAGAACAACTTTAAGCACGTCGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCACCCCCAGGCGCAGGCCCCCCAACGCCTCCTTACCAGGAGTTAGCCCAGCTGCTGGCCCAGCCAGAAGTGGGCCTCATCCACCAGTACTGCCAGGGTTACTGGCGCCATGTGCCCCCCAGCCCCAGGGAGGCTCCAGGGGCACCCCGGTCTCCTGAGCCCCAGGACCAGAAAAAGCCCCGGAACCGCCGGCACCACCCTCCGGACACATGAGGCCAGCTGCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCCCTTTTAATATAAAAGATATATATATATATATATATATATAAAATATCTATATTCTATACACACCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACTCAGCTGGAAGTCTACCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAGGGAAGAAGGGGCCATCACAGGATGCCAGCCCCTGCCTGGGTTGGGGGCACTCAGCCACGACCAGCCCCTTCCTGGGTATTTATTCTCTATTTATTGGGGATAGGAGAAGAGGCATCCTGCCTGGGTGGGACAGCCTCTTCAGCCCCTTCTCCCCTCCCCGCCTGGCCAGGGCAGGGCCACCCCACTCTACCTCCTTAGCTTTCCCTGTGCCACTTTGACTCAGAGGCTGGGAGCATAGCAGAGGGGCCAGGCCCAGGCAGAGCTGACGGGAGGCCCCAGCTCTGAGGGGAGGGGGTCCGTGGTAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTCAGGGGATGGGTGTGGATGTAATTAGCTCTGGGGGGCAGTTGGGTAGATGGGTGGGGGCTCCTGGTGGCCTTCTGCTGCCCAGGCCACAGCCGCCTTTGGGTTCCATCTTGCTAATAAACACTGGCTCTGGGACTAGA
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ENST00000381192.9_PAR_Y
CD99
Y
ACCCCCTCTGTCTCCTCCCCGGGCCCGGCGTTCCCGCCCCTTCTGTGCGCGCGTGGAGGCCGGGGCGGGGCGGGCGCAGCCGGCGCTGAGCTTGCAGGGCCGCTCCCCTCACCCGCCCCCTTCGAGTCCCCGGGCTTCGCCCCACCCGGCCCGTGGGGGAGTATCTGTCCTGCCGCCTTCGCCCACGCCCTGCACTCCGGGACCGTCCCTGCGCGCTCTGGGCGCACCATGGCCCGCGGGGCTGCGCTGGCGCTGCTGCTCTTCGGCCTGCTGGGTGTTCTGGTCGCCGCCCCGGATGGTGGTTTCGATTTATCCGATGCCCTTCCTGACAATGAAAACAAGAAACCCACTGCAATCCCCAAGAAACCCAGTGCTGGGGATGACTTTGACTTAGGAGATGCTGTTGTTGATGGAGAAAATGACGACCCACGACCACCGAACCCACCCAAACCGATGCCAAATCCAAACCCCAACCACCCTAGTTCCTCCGGTAGCTTTTCAGATGCTGACCTTGCGGATGGCGTTTCAGGTGGAGAAGGAAAAGGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGAAGAGGCCGACGCCCCAGGCGTGATCCCCGGGATTGTGGGGGCTGTCGTGGTCGCCGTGGCTGGAGCCATCTCTAGCTTCATTGCTTACCAGAAAAAGAAGCTATGCTTCAAAGAAAATGCAGAACAAGGGGAGGTGGACATGGAGAGCCACCGGAATGCCAACGCAGAGCCAGCTGTTCAGCGTACTCTTTTAGAGAAATAGAAGATTGTCGGCAGAAACAGCCCAGGCGTTGGCAGCAGGGTTAGAACAGCTGCCTGAGGCTCCTCCCTGAAGGACACCTGCCTGAGAGCAGAGATGGAGGCCTTCTGTTCACGGCGGATTCTTTGTTTTAATCTTGCGATGTGCTTTGCTTGTTGCTGGGCGGATGATGTTTACTAACGATGAATTTTACATCCAAAGGGGGATAGGCACTTGGACCCCCATTCTCCAAGGCCCGGGGGGGCGGTTTCCCATGGGATGTGAAAGGCTGGCCATTATTAAGTCCCTGTAACTCAAATGTCAACCCCACCGAGGCACCCCCCCGTCCCCCAGAATCTTGGCTGTTTACAAATCACGTGTCCATCGAGCACGTCTGAAACCCCTGGTAGCCCCGACTTCTTTTTAATTAAAATAAGGTAAGCCCTTCAATTTGTTTCTTCAATATTTCTTTCATTTGTAGGGATATTTGTTTTTCATATCAGACTAATAAAAAGAAATTAGAAACCAA
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ENST00000318008.10
LASP1
17
GCAGTCAGCCTGAGAGCGCTGAGGCGCCAGCACCGCGGGCCCCGCCGTCCCCCCAGGAACCCGCCCCCGCGCAGCCCCACGTCGCCCGGAGAGCGCGCCTCGCTGCGCGTGCCCTTGCCCGCGCCCGAGGCGCGTGCCCGCCCCAGTGCAGCCCCTCCTCCCCGCTGTGTTTATTAGGGGAAGGAGGGCGGAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCCCGCCAGCTCGCCTCGGGGAACAGGACGCGCGTGAGCTCAGGCGTCCCCGCCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAACTACAAGGGCTACGAGAAGAAGCCCTACTGCAACGCACACTACCCCAAGCAGTCCTTCACCATGGTGGCGGACACCCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCAGAGTCAGGTGCGCTACAAGGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAGTGCCCCGGTTTACCAGCAGCCCCAGCAGCAGCCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCGCCGCCGACGAGGACGAGGTCTCCTTCCAGGACGGGGACACCATCGTCAACGTGCAGCAGATCGACGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTTTTTTAAAACCTGCGACAGCTTGTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAGACCTGTTGGCCTGTGGGCCTCACCTGCCCCTCTGTTCTCTCCCCTCACATCCTCCTGCCCAGCTCCTCACATACCCACACATTCCAGGGCTGGGGTGAGCCTGACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGGGATGGCGATGGGGACTCTGCCGCTGTGTAGGGACCAGTGGGATGGGCTCTACCTCTCTTTCTCAAAGAGGGGGCTCTGCCCACCTGGGGTCTCTCTCCCTACCTCCCTCCTCAGGGGCAACAACAGGAGAATGGGGTTCCTGCTGTGGGGCGAATTCATCCCCTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAAGCACAGCTTGGGTCAGGTTCTTGCCTTTCTTAATTTTAGGGACAGCTACCGGAAGGAGGGGAACAAGGAGTTCTCTTCCGCAGCCCCTTTCCCCACGCCCACCCCCAGTCTCCAGGGACCCTTGCCTGCCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTTCAGCCTCCCTCAGCCCCCAGGATCTGGGTTAGGTGGCCGCTCCTCCCTGCTCCTCATGGGAAGATGTCTCAGAGCCTTCCATGACCTCCCCTCCCCAGCCCAATGCCAAGTGGACTTGGAGCTGCACAAAGTCAGCAGGGACCACTAAATCTCCAAGACCTGGTGTGCGGAGGCAGGAGCATGTATGTCTGCAGGTGTCTGACACGCAAGTGTGTGAGTGTGAGTGTGAGAGATGGGGCGGGGGTGTGTCTGTAGGTGTCTCTGGGCCTGTGTGTGGGTGGGGTTATGTGAGGGTATGAAGAGCTGTCTTCCCCTGAGAGTTTCCTCAGAACCCACAGTGAGAGGGGAGGGCTCCTGGGGCAGAGAAGTTCCTTAGGTTTTCTTTGGAATGAAATTCCTCCTTCCCCCCATCTCTGAGTGGAGGAAGCCCACCAATCTGCCCTTTGCAGTGTGCAGGGTGGAAGGTAAGAGGTTGGTGTGGAGTTGGGGCTGCCATAGGGTCTGCAGCCTGCTGGGGCTAAGCGGTGGAGGAAGGCTCTGTCACTCCAGGCATATGTTTCCCCATCTCTGTCTGGGGCTACAGAATAGGGTGGCAGAAGTGTCACCCTGTGGGTGTCTCCCTCGGGGGCTCTTCCCCTAGACCTCCCCCTCACTTACATAAAGCTCCCTTGAAGCAAGAAAGAGGGTCCCAGGGCTGCAAAACTGGAAGCACAGCCTCGGGGATGGGGAGGGAAAGACGGTGCTATATCCAGTTCCTGCTCTCTGCTCATGGGTGGCTGTGACAACCCTGGCCTCACTTGATTCATCTCTGGTTTTCTTGCCACCCTCTGGGAGTCCCCATCCCATTTTCATCCTGAGCCCAACCAGGCCCTGCCATTGGCCTCTTGTCCCTTGGCACACTTGTACCCACAGGTGAGGGGCAGGACCTGAAGGTATTGGCCTGTTCAACAATCAGTCATCATGGGTGTTTTTGTCAACTGCTTGTTAATTGATTTGGGGATGTTTGCCCCGAATGAGAGGTTGAGGAAAAGACTGTGGGTGGGGAGGCCCTGCCTGACCCATCCCTTTTCCTTTCTGGCCCCAGCCTAGGTGGAGGCAAGTGGAATATCTTATATTGGGCGATTTGGGGGCTCGGGGAGGCAGAGAATCTCTTGGGAGTCTTGGGTGGCGCTGGTGCATTCTGTTTCCTCTTGATCTCAAAGCACAATGTGGATTTGGGGACCAAAGGTCAGGGACACATCCCCTTAGAGGACCTGAGTTTGGGAGAGTGGTGAGTGGAAGGGAGGAGCAGCAAGAAGCAGCCTGTTTTCACTCAGCTTAATTCTCCTTCCCAGATAAGGCAAGCCAGTCATGGAATCTTGCTGCAGGCCCTCCCTCTACTCTTCCTGTCCTAAAAATAGGGGCCGTTTTCTTACACACCCCCAGAGAGAGGAGGGACTGTCACACTGGTGCTGAGTGACCGGGGGCTGCTGGGCGTCTGTTCTTTACCAAAACCATCCATCCCTAGAAGAGCACAGAGCCCTGAGGGGCTGGGCTGGGCTGGGCTGAGCCCCTGGTCTTCTCTACAGTTCACAGAGGTCTTTCAGCTCATTTAATCCCAGGAAAGAGGCATCAAAGCTAGAATGTGAATATAACTTTTGTGGACCAATACTAAGAATAACAAGAAGCCCAGTGGTGAGGAAAGTGCGTTCTCCCAGCACTGCCTCCTGTTTTCTCCCTCTCATGTCCCTCCAGGGAAAATGACTTTATTGCTTAATTTCTGCCTTTCCCCCCTCACACATGCACTTTTGGGCCTTTTTTTATAGCTGGAAAAAACAAAATACCACCCTACAAACCTGTATTTAAAAAGAAACAGAAATGACCACGTGAAATTTGCCTCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTTATATGGGGTTGTTGTCTCATTTTGGTCTGTTTTGGTCCCCTCCCTCGTGGGCTTGTGCTCGGGATCAAACCTTTCTGGCCTGTTATGATTCTGAACATTTGACTTGAACCACAAGTGAATCTTTCTCCTGGTGACTCAAATAAAAGTATAATTTTTACCTGCGGA
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ENST00000000412.7
M6PR
12
CCGGGAGCGGTCAGGCGCGTGACCCCGCGTGACCGGGGTGCGCGAGCCGAGAGGCCCTGGAAGCGGGACTCTGGGACCCCATTGAAAGAAAGGCAACCAGAAAAGGCGAAACGACAACCTCGATAGTGATTGGAGCTGATGGAACGAGGGCGGAGCTAAAGTCCCAGAATACTGGCCAATCAGAGTTTAAGATTATCAGGGAGCCCGGGAAGGGGAAAGGGGCGAAATGGTTCTATGGTCACATGCCGCGGGGTCTGGTGGGAGGAGCGGTTGCCCAGCGGCCTCTTGGCGCTTCCTGTTTCCGGTTCCCAGAGTGGGGCACAGCGAGGCGCTAGGGGGAACGCTGGCCTCTGAAACTAGCTCTGGGACCGGGGTCTGCGGCCGGCCCCTAGCTGGCCCCGTCTCCCATCCCCAGAAGGGTATTCACTGGGGATTCTGAGCTTTGGCTACTCCAGTTTCCCACGACACGATGTTCCCTTTCTACAGCTGCTGGAGGACTGGACTGCTACTACTACTCCTGGCTGTGGCAGTGAGAGAATCCTGGCAGACAGAAGAAAAAACTTGCGACTTGGTAGGAGAAAAGGGTAAAGAGTCAGAGAAAGAGTTGGCTCTAGTGAAGAGGCTGAAACCACTGTTTAATAAAAGCTTTGAGAGCACTGTGGGCCAGGGTTCAGACACATACATCTACATCTTCAGGGTGTGCCGGGAAGCTGGCAACCACACTTCTGGGGCAGGCCTGGTGCAAATCAACAAAAGTAATGGGAAGGAGACAGTGGTAGGGAGACTCAACGAGACTCACATCTTCAACGGAAGTAATTGGATCATGCTGATCTATAAAGGGGGTGATGAATATGACAACCACTGTGGCAAGGAGCAGCGTCGTGCAGTGGTGATGATCTCCTGCAATCGACACACCCTAGCGGACAATTTTAACCCTGTGTCTGAGGAGCGTGGCAAAGTCCAAGATTGTTTCTACCTCTTTGAGATGGATAGCAGCCTGGCCTGTTCACCAGAGATCTCCCACCTCAGTGTGGGTTCCATCTTACTTGTCACGTTTGCATCACTGGTTGCTGTTTATGTTGTTGGGGGGTTCCTATACCAGCGACTGGTAGTGGGAGCCAAAGGAATGGAGCAGTTTCCCCACTTAGCCTTCTGGCAGGATCTTGGCAACCTGGTAGCAGATGGCTGTGACTTTGTCTGCCGTTCTAAACCTCGAAATGTGCCTGCAGCATATCGTGGTGTGGGGGATGACCAGCTGGGGGAGGAGTCAGAAGAAAGGGATGACCATTTATTACCAATGTAGATTGCACTTTATATGTCCAGCCTCTTCCTCAGTCCCCCAAACCAAAGCTACACAGCCAGATTTCTCAAGCAGTCTCAACTCCAGTCCCTCATCTCACCCTTACTATTGCTCTTGCTTTCCAGTTTGCTTTTGATTTGCATCTTCTCACTAGTAAAACTGCCTTCCCTTTGTTCCTTATTTTCTGTTTTTTCTCTAGAGAGGTACAGTTGTAAGTCAGAGTTAATATAATAGGGCCTGTGAAAACAGAGGCTTTTGCATTGTCTCTTGACATCAGAAGTTACAATAGGCATATGGGCAAAATGGTGTAGCAGGCTCACTGGCCGTTTGTTTTTTAAACACATTTTCACAAGTTTTTGAGACACTGGATTTCTTTAATTAAAAAAAAAATGCCAAGAAACATTATTTATACAGGGTTGATTGCTTTCATGTTGTTATTCTGTACCCTATAGTAGCCTCCATGAGAATCTGGTATTTCTTGCTGCTTGGAACTACTTTGCAGTGATTACTTGGTTGCAGTCCAAGTACTCTCGTTTAGTCTGAGCCTGGAGATGTTCTAGACTTGCTTCTCCCACCTCTGAGATTAGGACAGGAAAAATGTGAAATTTCCCAATTACAGGATTATACGGTACCATCACATCATTTGTGGAAATTGGGGTGACTGTATAGCTGGGATTGGGCTAAGGACTGTGGTCTTATCTGTCCACATACAGCCAAAATGCCTATCCAGAAATCCAGTTCGTTGGAAAGGAAAATTGGTACTCCTGTGCCACAGGGGTTCCAGAAAAGGGAAGTCACTTTACCTTGCGGTGGTGGGATCCTGATGTCTTTCATCCATTTGTAGTAAAAGCTGGTAAAGCTTTTCTTACTCCTGGTTCCCTACCAGTATTTCTAAACATGTCGCACTTTCTCCACAGGCATGTGGTTTTGACCTTTTTTTCAATCTTCTAGAAAGGGAACGGAAGCAGAAGTGGGACATCGAGGGCTCTGCTGTCCTCTGCGCTGGGTGTGGAATGCTGCTGCACCTGTCCCTTCTGCTGGCTCAGGGAAGTGTCTTCTTGCCCACATTTCTGTGGGGAAAGGTTTTTAATCCTCTGATGCTTCCATCTTCCTGTTTAGGCCATGTGCCCAGAAACCTGGACTGATCTTTCTTTAATAGTGAACCCCTGGGCCACTGAAGAGTAACATGGCTCCACTGGACACAAAAGAGGGATGGAATCAACAGGCAGGGGGCCTTTTATAAGCCTTAGGAAAAGAAAATGAAACTATTTCATCTTTGGACTTTTCAATACTATTGGAGTGATTTTTTTCTTTCTAAACAGGGAAAATAATGTTACAAAAGCATCTTTTTTGTTATTTGTTTGCATCCCTCCCCCACACCCTGGTGTTTTAAAATGAAGAAAAAAAACCATCACCTTTTGTACAAAAACTCTTAATGATTAAAAAACAAACAAAA
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CFLAR
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NDUFAF7
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End of preview. Expand in Data Studio

Overview

mRNA localization annotates the subcellular compartments that mRNA are found in. This task is a multilabel classification -- mRNA can be found in more than one compartment. This dataset was computed from experimental APEX RNA seq data collected by Fazal et al. 2019.

This dataset is redistributed as part of mRNABench: https://github.com/morrislab/mRNABench

Data Format

Description of data columns:

  • target: Multihot labelling of cellular components that an mRNA appear in. The label positions correspond to: [Nucleus, Nucleolus, Lamina, Nuclear Pore, Cytosol, ERM, OMM, ER Lumen]
  • cds: Binary track which reports position of first nucleotide in each codon in CDS.
  • splice: Binary track which reports position of the 3' end of each exon, indicating splice sites.

Data Source

This dataset was generated using Supplementary Table 3 from Fazal et al. 2024. Please provide proper attribution if you use this dataset, and contact the author for permission regarding further redistribution.

Please attribute:

Original paper: https://www.cell.com/cell/fulltext/S0092-8674(19)30555-0
Original dataset source: https://ars.els-cdn.com/content/image/1-s2.0-S0092867419305550-mmc3.xlsx
Citation: Fazal F et al., "Atlas of Subcellular RNA Localization Revealed by APEX-Seq.", Cell, 2019 Jul 11;178(2):473-490.e26

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Size of downloaded dataset files:
7.98 MB
Size of the auto-converted Parquet files:
7.98 MB
Number of rows:
3,335

Collection including morrislab/rna-loc-fazal