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AmelieSchreiber 's Collections
ESMBind (ESMB) for Protein Binding Sites
QBind: QLoRA for ESM-2 Binding Sites Prediction
ESM-PTM: ESM-2 for Predicting PTM
ESM-Interact
Biomedical
LLMs

ESM-PTM: ESM-2 for Predicting PTM

updated Nov 2, 2023

This is a collection of LoRA and QLoRA finetuned ESM-2 models and datasets for predicting post translational modification sites on proteins.

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  • AmelieSchreiber/esm2_t30_150M_ptm_qlora_2100K_1000

    Updated Oct 24, 2023

    Note This is the largest and best performing model out of the bunch. It was also trained with a larger context window.


  • AmelieSchreiber/esm2_t30_150M_ptm_qlora_2100K

    Updated Oct 19, 2023

  • AmelieSchreiber/esm2_t6_8M_ptm_lora_500K

    Updated Oct 11, 2023

  • AmelieSchreiber/esm2_t12_35M_ptm_lora_2100K

    Token Classification • Updated Oct 11, 2023

  • AmelieSchreiber/esm2_t12_35M_ptm_qlora_2100K

    Updated Oct 16, 2023

  • AmelieSchreiber/ptm_500K

    Updated Oct 11, 2023 • 85 • 1
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