Christina Theodoris

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New activity in ctheodoris/Geneformer 1 day ago

fix TypeError: TrainingArguments.__init__() got an unexpected keyword argument 'evaluation_strategy'

1

#539 opened 2 days ago by

jackkuo

New activity in ctheodoris/Geneformer 3 days ago

add fallback task_type for LoraConfig to support different PEFT versions

#538 opened 3 days ago by

madhavanvvs

New activity in ctheodoris/Geneformer 9 days ago

best setting of num_train_epochs

1

#536 opened 12 days ago by

ZYSK-huggingface

New activity in ctheodoris/Geneformer 16 days ago

Question about Geneformer Perturbation and Extended Data Fig. 2C/2E

5

#534 opened about 1 month ago by

eastmancodes

New activity in ctheodoris/Geneformer 23 days ago

error running the notebook: extract_and_plot_cell_embeddings

1

#535 opened 23 days ago by

tomererez

New activity in ctheodoris/Geneformer 24 days ago

ERROR with AdamW

2

#511 opened 3 months ago by

DAARNIE

New activity in ctheodoris/Geneformer 26 days ago

Classifier data type error

1

#527 opened about 1 month ago by

yihan1119

TypeError: TrainingArguments.__init__() got an unexpected keyword argument 'evaluation_strategy' in cell_classification

1

#531 opened about 1 month ago by

zhang0730

updated a model 26 days ago

ctheodoris/Geneformer

Fill-Mask • Updated 1 day ago • 1.65k • • 238

New activity in ctheodoris/Geneformer about 1 month ago

Error in using the trainer.predict getting a tensor mismatch error when passing a dataset to the trainer.predict

4

#533 opened about 1 month ago by

GalenP

fully qualified imports to resolve name-space conflicts

#532 opened about 1 month ago by

madhavanvvs

fixed perturbed genes

12

#529 opened about 1 month ago by

ZYSK-huggingface

Rverse perturbation results

1

#530 opened about 1 month ago by

ZYSK-huggingface

New activity in ctheodoris/Geneformer about 2 months ago

Perturbed Embedding Extraction & Inhibition Function

5

#520 opened about 2 months ago by

fyan0001

fix quantize logic (and lora adapter weights loading)

4

#522 opened about 2 months ago by

yuz299

MTLClassifier.load_and_evaluate_test_model error

3

#475 opened 5 months ago by

saranyabalachandran

ddp_mtl_nccl_support

1

#524 opened about 2 months ago by

madhavanvvs

Genecorpus-95M availability

1

#526 opened about 2 months ago by

ZhexuanLiu

Query About Data Splitting Strategy for Fine-tuning Cell Classification Models

1

#521 opened about 2 months ago by

chenbohao

Cell_inds_to_perturb to control the range of cells

1

#525 opened about 2 months ago by

ZYSK-huggingface